
| ID | 57461 |
| フルテキストURL | |
| 著者 |
Sumi, Tomonari
Department of Chemistry, Faculty of Science, Okayama University,
ORCID
Kaken ID
publons
researchmap
Mitsutake, Ayori
Department of Physics, Keio University,
Maruyama, Yutaka
Department of Physics, Keio University,
|
| 抄録 | The three-dimensional reference interaction site model (3D-RISM) theory, which is one of the most applicable integral equation theories for molecular liquids, overestimates the absolute values of solvation-free-energy (SFE) for large solute molecules in water. To improve the free-energy density functional for the SFE of solute molecules, we propose a reference-modified density functional theory (RMDFT) that is a general theoretical approach to construct the free-energy density functional systematically. In the RMDFT formulation, hard-sphere (HS) fluids are introduced as the reference system instead of an ideal polyatomic molecular gas, which has been regarded as the appropriate reference system of the interaction-site-model density functional theory for polyatomic molecular fluids. We show that using RMDFT with a reference HS system can significantly improve the absolute values of the SFE for a set of neutral amino acid side-chain analogues as well as for 504 small organic molecules.
|
| キーワード | salvation-free-energy
classical density functional theory
3D-RISM theory
water
amino acid side-chain
chignolin
|
| 発行日 | 2015-05-31
|
| 出版物タイトル |
Journal of Computational Chemistry
|
| 巻 | 36巻
|
| 号 | 18号
|
| 開始ページ | 1359
|
| 終了ページ | 1369
|
| ISSN | 01928651
|
| NCID | AA00257341
|
| 資料タイプ |
学術雑誌論文
|
| 言語 |
英語
|
| OAI-PMH Set |
岡山大学
|
| 論文のバージョン | author
|
| PubMed ID | |
| DOI | |
| Web of Science KeyUT | |
| 関連URL | isVersionOf https://doi.org/10.1002/jcc.23942
|
| 助成機関名 |
文部科学省
|