1. OU Author List
  2. S
  3. Sudo, Yuki

Sudo, Yuki

ID (desc)
Identification of a Functionally Efficient and Thermally Stable Outward Sodium-Pumping Rhodopsin (BeNaR) from a Thermophilic Bacterium
FullText URL fulltext20231011-03.pdf
Author Kurihara, Marie| Thiel, Vera| Takahashi, Hirona| Kojima, Keiichi| Ward, David M.| Bryant, Donald A.| Sakai, Makoto| Yoshizawa, Susumu| Sudo, Yuki|
Keywords rhodopsin ion transport retinal isomerization optogenetics
Published Date 2023-02-01
Publication Title Chemical and Pharmaceutical Bulletin
Volume volume71
Issue issue2
Publisher Pharmaceutical Society of Japan
Start Page 154
End Page 164
ISSN 0009-2363
NCID AA00602100
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 The Pharmaceutical Society of Japan
File Version publisher
PubMed ID 36724978
DOI 10.1248/cpb.c22-00774
Web of Science KeyUT 000964953300013
Related Url isVersionOf https://doi.org/10.1248/cpb.c22-00774
Expression of microbial rhodopsins in Escherichia coli and their extraction and purification using styrene-maleic acid copolymers
FullText URL fulltext.pdf
Author Kojima, Keiichi| Sudo, Yuki|
Published Date 2022-03-18
Publication Title STAR Protocols
Volume volume3
Issue issue1
Publisher Cell Press
Start Page 101046
ISSN 2666-1667
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2021
File Version publisher
PubMed ID 34984357
DOI 10.1016/j.xpro.2021.101046
Web of Science KeyUT 001055085700004
Related Url isVersionOf https://doi.org/10.1016/j.xpro.2021.101046
Demonstration of iodide-dependent UVA-triggered growth inhibition in Saccharomyces cerevisiae cells and identification of its suppressive molecules
Author Ono, Ryota| Saeki, Nozomu| Kojima, Keiichi| Moriya, Hisao| Sudo, Yuki|
Keywords UVA Saccharomyces cerevisiae Iodide Growth inhibition Suppressive molecule
Note © 2023 Elsevier Inc. This manuscript version is made available under the CC-BY-NC-ND 4.0 license https://creativecommons.org/licenses/by-nc-nd/4.0/| This fulltext file will be available in Oct. 2024.|
Published Date 2023-10-15
Publication Title Biochemical and Biophysical Research Communications
Volume volume677
Publisher Elsevier BV
Start Page 1
End Page 5
ISSN 0006-291X
NCID AA00564395
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 Elsevier Inc.
File Version author
PubMed ID 37523893
DOI 10.1016/j.bbrc.2023.07.048
Web of Science KeyUT 001047346900001
Related Url isVersionOf https://doi.org/10.1016/j.bbrc.2023.07.048
Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota
FullText URL fulltext.pdf
Author Jaunet-Lahary, Titouan| Shimamura, Tatsuro| Hayashi, Masahiro| Nomura, Norimichi| Hirasawa, Kouta| Shimizu, Tetsuya| Yamashita, Masao| Tsutsumi, Naotaka| Suehiro, Yuta| Kojima, Keiichi| Sudo, Yuki| Tamura, Takashi| Iwanari, Hiroko| Hamakubo, Takao| Iwata, So| Okazaki, Kei-Ichi| Hirai, Teruhisa| Yamashita, Atsuko|
Note The version of record of this article, first published in Nature Communications, is available online at Publisher’s website: http://dx.doi.org/10.1038/s41467-023-36883-5|
Published Date 2023-04-03
Publication Title Nature Communications
Volume volume14
Issue issue1
Publisher Nature Portfolio
Start Page 1730
ISSN 2041-1723
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2023
File Version publisher
PubMed ID 37012268
DOI 10.1038/s41467-023-36883-5
Web of Science KeyUT 001002031500007
Related Url isVersionOf https://doi.org/10.1038/s41467-023-36883-5
A blue-shifted anion channelrhodopsin from the Colpodellida alga Vitrella brassicaformis
FullText URL fulltext.pdf
Author Kojima, Keiichi| Kawanishi, Shiho| Nishimura, Yosuke| Hasegawa, Masumi| Nakao, Shin| Nagata, Yuya| Yoshizawa, Susumu| Sudo, Yuki|
Note The version of record of this article, first published in Scientific Reports, is available online at Publisher’s website: http://dx.doi.org/10.1038/s41598-023-34125-8|
Published Date 2023-04-28
Publication Title Scientific Reports
Volume volume13
Issue issue1
Publisher nature portfolio
Start Page 6974
ISSN 2045-2322
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2023
File Version publisher
PubMed ID 37117398
DOI 10.1038/s41598-023-34125-8
Web of Science KeyUT 000985908500047
Related Url isVersionOf https://doi.org/10.1038/s41598-023-34125-8
Development of light-induced disruptive liposomes (LiDL) as a photoswitchable carrier for intracellular substance delivery
FullText URL fulltext20230619-04.pdf
Author Tsuneishi, Taichi| Kojima, Keiichi| Kubota, Fumika| Harashima, Hideyoshi| Yamada, Yuma| Sudo, Yuki|
Published Date 2023
Publication Title Chemical Communications
Volume volume59
Issue issue49
Publisher Royal Society of Chemistry (RSC)
Start Page 7591
End Page 7594
ISSN 1359-7345
NCID AA11071130
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Royal Society of Chemistry 2023
File Version publisher
PubMed ID 37254694
DOI 10.1039/d3cc02056h
Web of Science KeyUT 000999015900001
Related Url isVersionOf https://doi.org/10.1039/D3CC02056H
Identification of a Functionally Efficient and Thermally Stable Outward Sodium-Pumping Rhodopsin (BeNaR) from a Thermophilic Bacterium
FullText URL fulltext20230501-01.pdf
Author Kurihara, Marie| Thiel, Vera| Takahashi, Hirona| Kojima, Keiichi| Ward, David M.| Bryant, Donald A.| Sakai, Makoto| Yoshizawa, Susumu| Sudo, Yuki|
Keywords rhodopsin ion transport retinal isomerization optogenetics
Published Date 2023-02-01
Publication Title Chemical and Pharmaceutical Bulletin
Volume volume71
Issue issue2
Publisher Pharmaceutical Society of Japan
Start Page 154
End Page 164
ISSN 0009-2363
NCID AA00602100
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 The Pharmaceutical Society of Japan
File Version publisher
PubMed ID 36724978
DOI 10.1248/cpb.c22-00774
Web of Science KeyUT 000964953300013
Related Url isVersionOf https://doi.org/10.1248/cpb.c22-00774
Correction: Convergent evolution of animal and microbial rhodopsins
FullText URL fulltext.pdf
Author Kojima, Keiichi| Sudo, Yuki|
Published Date 2023-03-06
Publication Title RSC Advances
Volume volume13
Issue issue11
Publisher Royal Society of Chemistry
Start Page 7222
End Page 7224
ISSN 2046-2069
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 The Author(s).
File Version publisher
PubMed ID 36891494
DOI 10.1039/d3ra90016a
Web of Science KeyUT 000943987600001
Related Url isVersionOf https://doi.org/10.1039/d3ra90016a
Convergent evolution of animal and microbial rhodopsins
FullText URL fulltext.pdf
Author Kojima, Keiichi| Sudo, Yuki|
Published Date 2023-02-13
Publication Title RSC Advances
Volume volume13
Issue issue8
Publisher ROYAL SOC CHEMISTRY
Start Page 5367
End Page 5381
ISSN 2046-2069
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 The Author(s).
File Version publisher
PubMed ID 36793294
DOI 10.1039/d2ra07073a
Web of Science KeyUT 000929858500001
Related Url isVersionOf https://doi.org/10.1039/d2ra07073a
Detection of Membrane Potential-Dependent Rhodopsin Fluorescence Using Low-Intensity Light Emitting Diode for Long-Term Imaging
FullText URL fulltext.pdf
Author Kawanishi, Shiho| Kojima, Keiichi| Shibukawa, Atsushi| Sakamoto, Masayuki| Sudo, Yuki|
Published Date 2023-01-25
Publication Title ACS Omega
Volume volume8
Publisher American Chemical Society
Start Page 4826
End Page 4834
ISSN 2470-1343
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2023 The Authors.
File Version publisher
PubMed ID 36777568
DOI 10.1021/acsomega.2c06980
Web of Science KeyUT 000926216100001
Related Url isVersionOf https://doi.org/10.1021/acsomega.2c06980
Exploring the Retinal Binding Cavity of Archaerhodopsin-3 by Replacing the Retinal Chromophore With a Dimethyl Phenylated Derivative
FullText URL fulltext.pdf
Author Tsuneishi, Taichi| Takahashi, Masataka| Tsujimura, Masaki| Kojima, Keiichi| Ishikita, Hiroshi| Takeuchi, Yasuo| Sudo, Yuki|
Keywords retinal rhodopsin proton pump derivative photoreceptor
Published Date 2021-12-20
Publication Title Frontiers In Molecular Biosciences
Volume volume8
Publisher Frontiers Media SA
Start Page 794948
ISSN 2296-889X
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2021 Tsuneishi, Takahashi, Tsujimura, Kojima, Ishikita, Takeuchi and Sudo.
File Version publisher
PubMed ID 34988122
DOI 10.3389/fmolb.2021.794948
Web of Science KeyUT 000738864800001
Related Url isVersionOf https://doi.org/10.3389/fmolb.2021.794948
Proton transfer pathway in anion channelrhodopsin-1
FullText URL fulltext.pdf
Author Tsujimura, Masaki| Kojima, Keiichi| Kawanishi, Shiho| Sudo, Yuki| Ishikita, Hiroshi|
Published Date 2021-12-21
Publication Title Elife
Volume volume10
Publisher eLIFE SCIENCES PUBL LTD
Start Page e72264
ISSN 2050-084X
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © Tsujimura et al.
File Version publisher
PubMed ID 34930528
DOI 10.7554/eLife.72264
Web of Science KeyUT 000733603500001
Related Url isVersionOf https://doi.org/10.7554/eLife.72264
Microbial Rhodopsins as Multi-functional Photoreactive Membrane Proteins for Optogenetics
FullText URL fulltext20211109-3.pdf
Author Nakao, Shin| Kojima, Keiichi| Sudo, Yuki|
Keywords rhodopsin optogenetics retinal signal transduction
Published Date 2021-10-1
Publication Title Biological and Pharmaceutical Bulletin
Volume volume44
Issue issue10
Publisher Pharmaceutical Society of Japan
Start Page 1357
End Page 1363
ISSN 0918-6158
NCID AA10885497
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © 2021 The Pharmaceutical Society of Japan
File Version publisher
PubMed ID 34602542
DOI 10.1248/bpb.b21-00544
Web of Science KeyUT 000703500200002
Related Url isVersionOf https://doi.org/10.1248/bpb.b21-00544
Functional expression of the eukaryotic proton pump rhodopsin OmR2 in Escherichia coli and its photochemical characterization
FullText URL fulltext.pdf
Author Kikuchi, Masuzu| Kojima, Keiichi| Nakao, Shin| Yoshizawa, Susumu| Kawanishi, Shiho| Shibukawa, Atsushi| Kikukawa, Takashi| Sudo, Yuki|
Published Date 2021-07-20
Publication Title Scientific Reports
Volume volume11
Issue issue1
Publisher Nature Portfolio
Start Page 14765
ISSN 2045-2322
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2021
File Version publisher
PubMed ID 34285294
DOI 10.1038/s41598-021-94181-w
Web of Science KeyUT 000692201200025
Related Url isVersionOf https://doi.org/10.1038/s41598-021-94181-w
Lokiarchaeota archaeon schizorhodopsin-2 (LaSzR2) is an inward proton pump displaying a characteristic feature of acid-induced spectral blue-shift
FullText URL fulltext.pdf
Author Kojima, Keiichi| Yoshizawa, Susumu| Hasegawa, Masumi| Nakama, Masaki| Kurihara, Marie| Kikukawa, Takashi| Sudo, Yuki|
Published Date 2020-11-30
Publication Title Scientific Reports
Volume volume10
Issue issue1
Publisher Nature Research
Start Page 20857
ISSN 2045-2322
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2020
File Version publisher
PubMed ID 33257762
DOI 10.1038/s41598-020-77936-9
Web of Science KeyUT 000609202800018
Related Url isVersionOf https://doi.org/10.1038/s41598-020-77936-9
Vectorial Proton Transport Mechanism of RxR, a Phylogenetically Distinct and Thermally Stable Microbial Rhodopsin
FullText URL fulltext.pdf
Author Kojima, Keiichi| Ueta, Tetsuya| Noji, Tomoyasu| Saito, Keisuke| Kanehara, Kanae| Yoshizawa, Susumu| Ishikita, Hiroshi| Sudo, Yuki|
Keywords Biochemistry Biophysics
Published Date 2020-01-14
Publication Title Scientific Reports
Volume volume10
Issue issue1
Publisher Nature
Start Page 282
ISSN 2045-2322
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
Copyright Holders © The Author(s) 2020
File Version publisher
PubMed ID 31937866
DOI 10.1038/s41598-019-57122-2
Web of Science KeyUT 000562803500001
Related Url isVersionOf https://doi.org/10.1038/s41598-019-57122-2
The Unlimited Potential of Microbial Rhodopsins as Optical Tools
FullText URL fulltext.pdf
Author Kojima, Keiichi| Shibukawa, Atsushi| Sudo, Yuki|
Published Date 2019-12-09
Publication Title Biochemistry
Volume volume59
Issue issue3
Publisher American Chemical Society
Start Page 218
End Page 229
ISSN 0006-2960
NCID AA00564599
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version author
PubMed ID 31815443
DOI 10.1021/acs.biochem.9b00768
Web of Science KeyUT 000510530400003
Related Url isVersionOf https://doi.org/10.1021/acs.biochem.9b00768
Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12
FullText URL Biochemistry_58_26_2934.pdf
Author Shibukawa, Atsushi| Kojima, Keiichi| Nakajima, Yu| Nishimura, Yosuke| Yoshizawa, Susumu| Sudo, Yuki|
Note This fulltext will be available in Jun 2020|
Published Date 2019-05-31
Publication Title Biochemistry
Volume volume58
Issue issue26
Publisher American Chemical Society
Start Page 2934
End Page 2943
ISSN 00062960
NCID AA00564599
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version author
PubMed ID 31150215
DOI 10.1021/acs.biochem.9b00257
Related Url isVersionOf https://doi.org/10.1021/acs.biochem.9b00257
Quantitation of the neural silencing activity of anion channelrhodopsins in Caenorhabditis elegans and their applicability for long-term illumination
FullText URL SciRep_9_7863.pdf
Author Yamanashi, Taro| Maki, Misayo| Kojima, Keiichi| Shibukawa, Atsushi| Tsukamoto, Takashi| Chowdhury, Srikanta| Yamanaka, Akihiro| Takagi, Shin| Sudo, Yuki|
Published Date 2019-05-27
Publication Title Scientific reports
Volume volume9
Issue issue1
Publisher Nature Publishing Group
Start Page 7863
ISSN 20452322
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version publisher
PubMed ID 31133660
DOI 10.1038/s41598-019-44308-x
Related Url isVersionOf https://doi.org/10.1038/s41598-019-44308-x
Demonstration of a Light-Driven SO42- Transporter and Its Spectroscopic Characteristics.
FullText URL JoAmChemSoc_2017_139_12_4376.pdf
Author Niho, Akiko| Yoshizawa, Susumu| Tsukamoto, Takashi| Kurihara, Marie| Tahara, Shinya| Nakajima, Yu| Mizuno, Misao| Kuramochi, Hikaru| Tahara, Tahei| Mizutani, Yasuhisa| Sudo, Yuki|
Note This document is the Accepted Manuscript version of a Published Work that appeared in final form in Journal of the American Chemical Society, copyright © American Chemical Society after peer review and technical editing by the publisher.|
Published Date 2017-03-29
Publication Title Journal of the American Chemical Society
Volume volume139
Issue issue12
Publisher American Chemical Society
Start Page 4376
End Page 4389
ISSN 00027863
NCID AA00692602
Content Type Journal Article
language English
OAI-PMH Set 岡山大学
File Version author
PubMed ID 28257611
DOI 10.1021/jacs.6b12139
Web of Science KeyUT 000398247100034
Related Url isVersionOf https://doi.org/10.1021/jacs.6b12139
Okayama University Library
3-1-1 Tsushima-naka, Kita-ku, Okayama
700-8530, JAPAN
Copyright（C）2010-2024 Okayama University All Rights Reserved.