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ID 66564
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Ishii, Tomoya Graduate School of Environmental, Life, Natural Science and Technology, Okayama University
Tsuchida, Natsuki Faculty of Agriculture, Okayama University
Hemelda, Niarsi Merry Graduate School of Environmental, Life, Natural Science and Technology, Okayama University
Saito, Kirara Graduate School of Environmental, Life, Natural Science and Technology, Okayama University
Bao, Jiyuan Graduate School of Environmental, Life, Natural Science and Technology, Okayama University
Watanabe, Megumi Graduate School of Environmental, Life, Natural Science and Technology, Okayama University
Toyoda, Atsushi Department of Genomics and Evolutionary Biology, National Institute of Genetics
Matsubara, Takehiro Okayama University Hospital Biobank, Okayama University Hospital
Sato, Mayuko Mass Spectrometry and Microscopy Unit, Technology Platform Division, RIKEN Center for Sustainable Resource Science
Toyooka, Kiminori Mass Spectrometry and Microscopy Unit, Technology Platform Division, RIKEN Center for Sustainable Resource Science
Ishihama, Nobuaki Plant Immunity Research Group, RIKEN Center for Sustainable Resource Science
Shirasu, Ken Plant Immunity Research Group, RIKEN Center for Sustainable Resource Science
Matsui, Hidenori Graduate School of Environmental, Life, Natural Science and Technology, Okayama University ORCID Kaken ID researchmap
Toyoda, Kazuhiro Graduate School of Environmental, Life, Natural Science and Technology, Okayama University ORCID Kaken ID publons researchmap
Ichinose, Yuki Graduate School of Environmental, Life, Natural Science and Technology, Okayama University ORCID Kaken ID publons researchmap
Hayashi, Tetsuya Department of Bacteriology, Graduate School of Medical Sciences, Kyushu University
Kawaguchi, Akira Western Region Agricultural Research Center (WARC), National Agricultural and Food Research Organization (NARO)
Noutoshi, Yoshiteru Graduate School of Environmental, Life, Natural Science and Technology, Okayama University ORCID Kaken ID publons researchmap
Abstract
Tailocins are headless phage tail structures that mediate interbacterial antagonism. Although the prototypical tailocins, R- and F-pyocins, in Pseudomonas aeruginosa, and other predominantly R-type tailocins have been studied, their presence in Alphaproteobacteria remains unexplored. Here, we report the first alphaproteobacterial F-type tailocin, named rhizoviticin, as a determinant of the biocontrol activity of Allorhizobium vitis VAR03-1 against crown gall. Rhizoviticin is encoded by a chimeric prophage genome, one providing transcriptional regulators and the other contributing to tail formation and cell lysis, but lacking head formation genes. The rhizoviticin genome retains a nearly intact early phage region containing an integrase remnant and replication-related genes critical for downstream gene transcription, suggesting an ongoing transition of this locus from a prophage to a tailocin-coding region. Rhizoviticin is responsible for the most antagonistic activity in VAR03-1 culture supernatant against pathogenic A. vitis strain, and rhizoviticin deficiency resulted in a significant reduction in the antitumorigenic activity in planta. We identified the rhizoviticin-coding locus in eight additional A. vitis strains from diverse geographical locations, highlighting a unique survival strategy of certain Rhizobiales bacteria in the rhizosphere. These findings advance our understanding of the evolutionary dynamics of tailocins and provide a scientific foundation for employing rhizoviticin-producing strains in plant disease control.
Keywords
tailocin
phage tail-like bacteriocin
Allorhizobium vitris
Alphaproteobacteria
biocontrol
crown gall disease
interbacterial antagonism
grapevine
Published Date
2024-01-18
Publication Title
The ISME Journal
Volume
volume18
Issue
issue1
Publisher
Oxford University Press (OUP)
Start Page
1
End Page
12
ISSN
1751-7362
Content Type
Journal Article
language
English
OAI-PMH Set
岡山大学
Copyright Holders
© The Author(s) [2024].
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publisher
DOI
Web of Science KeyUT
Related Url
isVersionOf https://doi.org/10.1093/ismejo/wrad003
License
https://creativecommons.org/licenses/by/4.0/
Citation
Tomoya Ishii, Natsuki Tsuchida, Niarsi Merry Hemelda, Kirara Saito, Jiyuan Bao, Megumi Watanabe, Atsushi Toyoda, Takehiro Matsubara, Mayuko Sato, Kiminori Toyooka, Nobuaki Ishihama, Ken Shirasu, Hidenori Matsui, Kazuhiro Toyoda, Yuki Ichinose, Tetsuya Hayashi, Akira Kawaguchi, Yoshiteru Noutoshi, Rhizoviticin is an alphaproteobacterial tailocin that mediates biocontrol of grapevine crown gall disease, The ISME Journal, Volume 18, Issue 1, January 2024, wrad003, https://doi.org/10.1093/ismejo/wrad003
Funder Name
Japan Society for the Promotion of Science
Ministry of Education, Culture, Sports, Science and Technology
Okayama University
助成番号
JP17H03778
JP20K20572
JP16H06279
JP17H06172