Shen, Jian-Ren - OU Author List - OKAYAMA UNIVERSITY SCIENTIFIC ACHIEVEMENT REPOSITORY

Roles of PsbI and PsbM in photosystem II dimer formation and stability studied by deletion mutagenesis and X-ray crystallography

Author	Kawakami, Keisuke\| Umena, Yasufumi\| Iwai, Masako\| Kawabata, Yousuke\| Ikeuchi, Masahiko\| Kamiya, Nobuo\| Shen, Jian-Ren\|
Published Date	2011-03
Publication Title	Biochimica et Biophysica Acta (BBA) - Bioenergetics
Volume	volume1807
Issue	issue3
Content Type	Journal Article

Structure of the catalytic, inorganic core of oxygen-evolving photosystem II at 1.9 Å resolution

Author	Kawakami, Keisuke\| Umena, Yasufumi\| Kamiya, Nobuo\| Shen, Jian-Ren\|
Published Date	2011
Publication Title	Journal of Photochemistry and Photobiology B: Biology
Volume	volume104
Issue	issue1-2
Content Type	Journal Article

Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å

Author	Umena, Yasufumi\| Kawakami, Keisuke\| Shen, Jian-Ren\| Kamiya, Nobuo\|
Published Date	2011-05-05
Publication Title	Nature
Volume	volume473
Issue	issue7345
Content Type	Journal Article

Mechanisms of Acido-Tolerance and Characteristics of Photosystems in an Acidophilic and Thermophilic Red Alga, Cyanidium Caldarium

Author	Enami, Isao\| Adachi, Hideyuki\| Shen, Jian-Ren\|
Published Date	2010
Publication Title	Red Algae in the Genomic Age
Volume	volume13
Content Type	Journal Article

Binding and Functional Properties of Five Extrinsic Proteins in Oxygen-evolving Photosystem II from a Marine Centric Diatom, Chaetoceros gracilis

Author	Nagao, Ryo\| Moriguchi, Akira\| Tomo, Tatsuya\| Niikura, Ayako\| Nakajima, Saori\| Suzuki, Takehiro\| Okumura, Akinori\| Iwai, Masako\| Shen, Jian-Ren\| Ikeuchi, Masahiko\| Enami, Isao\|
Published Date	2010-09-17
Publication Title	The Journal of Biological Chemistry
Volume	volume285
Issue	issue38
Content Type	Journal Article

Purification and Crystallization of Oxygen-Evolving Photosystem II Core Complex from Thermophilic Cyanobacteria

Author	Shen, Jian-Ren\| Kawakami, Keisuke\| Koike, Hiroyuki\|
Published Date	2011
Publication Title	Methods in Molecular Biology
Volume	volume684
Content Type	Journal Article

Structural and functional studies on Ycf12 (Psb30) and PsbZ-deletion mutants from a thermophilic cyanobacterium

Author	Takasaka, Kenji\| Iwai, Masako\| Umena, Yasufumi\| Kawakami, Keisuke\| Ohmori, Yukari\| Ikeuchi, Masahiko\| Takahashi, Yuichiro\| Kamiya, Nobuo\| Shen, Jian-Ren\|
Published Date	2010-02
Publication Title	Biochimica et Biophysica Acta (BBA) - Bioenergetics
Volume	volume1797
Issue	issue2
Content Type	Journal Article

Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses

FullText URL	Nature-Shen manuscript for deposit(151002).pdf
Author	Suga, Michihiro\| Akita, Fusamichi\| Hirata, Kunio\| Ueno, Go\| Murakami, Hironori\| Nakajima, Yoshiki\| Shimizu, Tetsuya\| Yamashita, Keitaro\| Yamamoto, Masaki\| Ago, Hideo\| Shen, Jian-Ren\|
Note	The final publication is available at Nature via http://dx.doi.org/10.1038/nature13991\|
Published Date	2015-01-01
Publication Title	Nature
Volume	volume517
Publisher	Nature Publishing Group
Start Page	99
End Page	103
ISSN	0028-0836
NCID	AA00752384
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2015 Michihiro Suga et al.; licensee Macmillan Publishers Limited.
File Version	author
PubMed ID	25470056
DOI	10.1038/nature13991
Web of Science KeyUT	000347178400043

Structure and energy transfer pathways of the plant photosystem I-LHCI supercomplex

FullText URL	CurrOpinStructBiol_39_46.pdf
Author	Suga, Michihiro\| Qin, Xiaochun\| Kuang, Tingyun\| Shen, Jian-Ren\|
Note	© 2016. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/\|
Published Date	2016-08
Publication Title	Current Opinion in Structural Biology
Volume	volume39
Publisher	CURRENT BIOLOGY LTD
Start Page	46
End Page	53
ISSN	0959-440X
NCID	AA10836185
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	http://creativecommons.org/licenses/by-nc-nd/4.0/
File Version	author
PubMed ID	27131043
DOI	10.1016/j.sbi.2016.04.004
Web of Science KeyUT	000386411000008
Related Url	https://doi.org/10.1016/j.sbi.2016.04.004

Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL

FullText URL	Nature_543_7643_131.pdf
Author	Suga, Michihiro\| Akita, Fusamichi\| Sugahara, Michihiro\| Kubo, Minoru\| Nakajima, Yoshiki\| Nakane, Takanori\| Yamashita, Keitaro\| Umena, Yasufumi\| Nakabayashi, Makoto\| Yamane, Takahiro\| Nakano, Takamitsu\| Suzuki, Mamoru\| Masuda, Tetsuya\| Inoue, Shigeyuki\| Kimura, Tetsunari\| Nomura, Takashi\| Yonekura, Shinichiro\| Yu, Long-Jiang\| Sakamoto, Tomohiro\| Motomura, Taiki\| Chen, Jing-Hua\| Kato, Yuki\| Noguchi, Takumi\| Tono, Kensuke\| Joti, Yasumasa\| Kameshima, Takashi\| Hatsui, Takaki\| Nango, Eriko\| Tanaka, Rie\| Naitow, Hisashi\| Matsuura, Yoshinori\| Yamashita, Ayumi\| Yamamoto, Masaki\| Nureki, Osamu\| Yabashi, Makina\| Ishikawa, Tetsuya\| Iwata, So\| Shen, Jian-Ren\|
Published Date	2017-03
Publication Title	Nature
Volume	volume543
Issue	issue7643
Publisher	Nature Publishing Group
Start Page	131
End Page	135
ISSN	0028-0836
NCID	AA00752384
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	https://creativecommons.org/licenses/by-nc-nd/4.0/deed.ja
File Version	author
PubMed ID	28219079
DOI	10.1038/nature21400
Web of Science KeyUT	000395671500047
Related Url	https://doi.org/10.1038/nature21400

An oxyl/oxo mechanism for dioxygen bond formation in PSII revealed by X-ray free electron lasers

FullText URL	Science366_6463_334.pdf
Author	Suga, Michihiro\| Akita, Fusamichi\| Yamashita, Keitaro\| Nakajima, Yoshiki\| Ueno, Go\| Li, Hongjie\| Yamane, Takahiro\| Hirata, Kunio\| Umena, Yasufumi\| Yonekura, Shinichiro\| Yu, Long-Jiang\| Murakami, Hironori\| Nomura, Takashi\| Kimura, Tetsunari\| Kubo, Minoru\| Baba, Seiki\| Kumasaka, Takashi\| Tono, Kensuke\| Yabashi, Makina\| Isobe, Hiroshi\| Yamaguchi, Kizashi\| Yamamoto, Masaki\| Ago, Hideo\| Shen, Jian-Ren\|
Note	This is the author’s version of the work. It is posted here by permission of the AAAS for personal use, not for redistribution. The definitive version was published in [An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser] on 2019 Oct 18;366(6463), DOI: 10.1126/science.aax6998\|
Published Date	2019-10-18
Publication Title	Science
Volume	volume366
Issue	issue6463
Publisher	American Association for the Advancement of Science
Start Page	334
End Page	338
ISSN	0036-8075
NCID	AA00835277
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
File Version	author
PubMed ID	31624207
DOI	10.1126/science.aax6998
Web of Science KeyUT	000491290000045
Related Url	isVersionOf https://doi.org/10.1126/science.aax6998

Time-resolved studies of metalloproteins using X-ray free electron laser radiation at SACLA

FullText URL	fulltext.pdf
Author	Suga, Michihiro\| Shimada, Atsuhiro\| Akita, Fusamichi\| Shen, Jian-Ren\| Tosha, Takehiko\| Sugimoto, Hiroshi\|
Keywords	Heme Metalloproteins Proton pump Radiation damage Serial femtosecond crystallography X-ray free-electron laser
Published Date	2020-02-29
Publication Title	Biochimica et Biophysica Acta (BBA) - General Subjects
Volume	volume1864
Issue	issue2
Publisher	SI
Start Page	129466
ISSN	03044165
NCID	AA00564679
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2019 The Author(s). Published by Elsevier B.V.
File Version	publisher
PubMed ID	31678142
DOI	10.1016/j.bbagen.2019.129466
Web of Science KeyUT	000508740100002
Related Url	isVersionOf https://doi.org/10.1016/j.bbagen.2019.129466

Structural basis for the adaptation and function of chlorophyll f in photosystem I

FullText URL	fulltext.pdf
Author	Kato, Koji\| Shinoda, Toshiyuki\| Nagao, Ryo\| Akimoto, Seiji\| Suzuki, Takehiro\| Dohmae, Naoshi\| Chen, Min\| Allakhverdiev, Suleyman I.\| Shen, Jian-Ren\| Akita, Fusamichi\| Miyazaki, Naoyuki\| Tomo, Tatsuya\|
Published Date	2020-01-13
Publication Title	Nature Communications
Volume	volume11
Issue	issue1
Publisher	Nature Research
Start Page	238
ISSN	2041-1723
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2020
File Version	publisher
PubMed ID	31932639
DOI	10.1038/s41467-019-13898-5
Web of Science KeyUT	000511916800016
Related Url	isVersionOf https://doi.org/10.1038/s41467-019-13898-5

Structural basis for assembly and function of a diatom photosystem I-light-harvesting supercomplex

FullText URL	fulltext.pdf
Author	Nagao, Ryo\| Kato, Koji\| Ifuku, Kentaro\| Suzuki, Takehiro\| Kumazawa, Minoru\| Uchiyama, Ikuo\| Kashino, Yasuhiro\| Dohmae, Naoshi\| Akimoto, Seiji\| Shen, Jian-Ren\| Miyazaki, Naoyuki\| Akita, Fusamichi\|
Published Date	2020-05-18
Publication Title	Nature Communications
Volume	volume11
Issue	issue1
Publisher	Nature Research
ISSN	2041-1723
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2020
File Version	publisher
PubMed ID	32424145
DOI	10.1038/s41467-020-16324-3
Web of Science KeyUT	000536699300001
Related Url	isVersionOf https://doi.org/10.1038/s41467-020-16324-3

Structure of a cyanobacterial photosystem I surrounded by octadecameric IsiA antenna proteins

FullText URL	fulltext.pdf
Author	Akita, Fusamichi\| Nagao, Ryo\| Kato, Koji\| Nakajima, Yoshiki\| Yokono, Makio\| Ueno, Yoshifumi\| Suzuki, Takehiro\| Dohmae, Naoshi\| Shen, Jian-Ren\| Akimoto, Seiji\| Miyazaki, Naoyuki\|
Keywords	Cryoelectron microscopy Photosystem I
Published Date	2020-05-11
Publication Title	Communications Biology
Volume	volume3
Issue	issue1
Publisher	Nature
Start Page	232
ISSN	2399-3642
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2020
File Version	publisher
PubMed ID	32393811
DOI	10.1038/s42003-020-0949-6
Web of Science KeyUT	000534339100004
Related Url	isVersionOf https://doi.org/10.1038/s42003-020-0949-6

Spectral tuning of light-harvesting complex II in the siphonous alga Bryopsis corticulans and its effect on energy transfer dynamics

FullText URL	fulltext.pdf
Author	Akhtar, Parveen\| Nowakowski, Paweł J.\| Wang, Wenda\| Do, Thanh Nhut\| Zhao, Songhao\| Siligardi, Giuliano\| Garab, Győző\| Shen, Jian-Ren\| Tan, Howe-Siang\| Lambrev, Petar H.\|
Keywords	Circular dichroism Light-harvesting complexes Marine algae Photosynthesis Time-resolved spectroscopy Two-dimensional spectroscopy
Published Date	2020-07-01
Publication Title	Biochimica et Biophysica Acta (BBA) - Bioenergetics
Volume	volume1861
Issue	issue7
Publisher	Elsevier
Start Page	148191
ISSN	0005-2728
NCID	AA00564646
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2020 The Authors
File Version	publisher
PubMed ID	32201306
DOI	10.1016/j.bbabio.2020.148191
Web of Science KeyUT	000536941400006
Related Url	isVersionOf https://doi.org/10.1016/j.bbabio.2020.148191

Structural basis for energy transfer in a huge diatom PSI-FCPI supercomplex

FullText URL	fulltext.pdf
Author	Xu, Caizhe\| Pi, Xiong\| Huang, Yawen\| Han, Guangye\| Chen, Xiaobo\| Qin, Xiaochun\| Huang, Guoqiang\| Zhao, Songhao\| Yang, Yanyan\| Kuang, Tingyun\| Wang, Wenda\| Sui, Sen-Fang\| Shen, Jian-Ren\|
Keywords	Bioenergetics Cryoelectron microscopy Photosystem I
Published Date	2020-10-08
Publication Title	Nature Communications
Volume	volume11
Issue	issue1
Publisher	Nature Research
Start Page	5081
ISSN	2041-1723
NCID	AA12645905
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2020
File Version	publisher
PubMed ID	33033236
DOI	10.1038/s41467-020-18867-x
Web of Science KeyUT	000581918200012
Related Url	isVersionOf https://doi.org/10.1038/s41467-020-18867-x

Exploring reaction pathways for the structural rearrangements of the Mn cluster induced by water binding in the S3 state of the oxygen evolving complex of photosystem II

FullText URL	fulltext.pdf
Author	Isobe, Hiroshi\| Shoji, Mitsuo\| Suzuki, Takayoshi\| Shen, Jian-Ren\| Yamaguchi, Kizashi\|
Keywords	Photosynthesis Water oxidation Photosystem II Oxygen evolving complex Mn4CaO6 cluster Ligand environment
Note	© 2020 Elsevier B.V. This manuscript version is made available under the CC-BY-NC-ND 4.0 License. http://creativecommons.org/licenses/by-nc-nd/4.0/. This is the accepted manuscript version. The formal published version is available at [https://doi.org/10.1016/j.jphotochem.2020.112905] . \|
Published Date	2021-01-15
Publication Title	Journal of Photochemistry and Photobiology A: Chemistry
Volume	volume405
Publisher	Elsevier
Start Page	112905
ISSN	1010-6030
NCID	AA10684407
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© 2020 Elsevier B.V.
File Version	author
DOI	10.1016/j.jphotochem.2020.112905
Official Url	https://www.sciencedirect.com/science/article/abs/pii/S1010603020307024\|
Related Url	isVersionOf https://doi.org/10.1016/j.jphotochem.2020.112905

Antenna arrangement and energy-transfer pathways of PSI-LHCI from the moss Physcomitrella patens

FullText URL	fulltext.pdf
Author	Yan, Qiujing\| Zhao, Liang\| Wang, Wenda\| Pi, Xiong\| Han, Guangye\| Wang, Jie\| Cheng, Lingpeng\| He, Yi-Kun\| Kuang, Tingyun\| Qin, Xiaochun\| Sui, Sen-Fang\| Shen, Jian-Ren\|
Published Date	2021-02-16
Publication Title	Cell Discovery
Volume	volume7
Issue	issue1
Publisher	Springer Nature
Start Page	10
ISSN	2056-5968
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2021
File Version	publisher
PubMed ID	33589616
DOI	10.1038/s41421-021-00242-9
Web of Science KeyUT	000618354400001
Related Url	isVersionOf https://doi.org/10.1038/s41421-021-00242-9

Structure of photosystem I-LHCI-LHCII from the green alga Chlamydomonas reinhardtii in State 2

FullText URL	fulltext.pdf
Author	Huang, Zihui\| Shen, Liangliang\| Wang, Wenda\| Mao, Zhiyuan\| Yi, Xiaohan\| Kuang, Tingyun\| Shen, Jian-Ren\| Zhang, Xing\| Han, Guangye\|
Published Date	2021-02-17
Publication Title	Nature Communications
Volume	volume12
Issue	issue1
Publisher	Nature
Start Page	1100
ISSN	2041-1723
NCID	AA12645905
Content Type	Journal Article
language	English
OAI-PMH Set	岡山大学
Copyright Holders	© The Author(s) 2021
File Version	publisher
PubMed ID	33597543
DOI	10.1038/s41467-021-21362-6
Web of Science KeyUT	000621232800019
Related Url	isVersionOf https://doi.org/10.1038/s41467-021-21362-6